SNP Detail For rs17721822
1.Mapping Information
Human SNP ID rs17721822
Human chromosome chr20
Human SNP position 6488949
Pig chromosome chr17
Pig SNP position 16834041
2.Annotation Information
PubMed ID25282103
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25282103
StudyDefining the role of common variation in the genomic and biological architecture of adult human height.
Disease/TraitHeight
Initial sample253,288 European ancestry individuals
Replication sample80,067 European ancestry individuals
Region20p12.3
Chromosome idchr20
Chromosome position6488949
Reported geneBMP2
Mapped geneCASC20
Upstream gene id
Downstream gene id
SNP gene ids101929244
Upstream gene distance
Downstream gene distance
SNP risk allelers17721822-A
SNPsrs17721822
Merged0
SNP id current17721822
Contextintron_variant
Intergenic0
Allele frequency0.372
P value3E-29
Pvalue mlog28.5228787452803
P value text
Or beta0.035
%95 Ci[0.029-0.041] unit decrease
PlatformAffymetrix, Illumina, Perlegen [2550858] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002647