Human SNP ID | rs1770678 |
---|---|
Human chromosome | chr1 |
Human SNP position | 82299369 |
Pig chromosome | chr6 |
Pig SNP position | 121669225 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 1p31.1 |
Chromosome id | chr1 |
Chromosome position | 82299369 |
Reported gene | LPHN2 |
Mapped gene | ADGRL2 - LOC105378814 |
Upstream gene id | 23266 |
Downstream gene id | 105378814 |
SNP gene ids | |
Upstream gene distance | 306631 |
Downstream gene distance | 322161 |
SNP risk allele | rs170678-G |
SNPs | rs1770678 |
Merged | 0 |
SNP id current | 1770678 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.07 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (TBF-b1 ) |
Or beta | 0.03 |
%95 Ci | [NR] pg/mL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | transforming growth factor beta measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004818 |
Study accession | GCST001762 |