SNP Detail For rs17702901
1.Mapping Information
Human SNP ID rs17702901
Human chromosome chr15
Human SNP position 92387181
Pig chromosome chr7
Pig SNP position 92463631
2.Annotation Information
PubMed ID23643386
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23643386
StudyWeight loss after gastric bypass is associated with a variant at 15q26.1.
Disease/TraitWeight loss (gastric bypass surgery)
Initial sample693 European ancestry individuals
Replication sample327 European ancestry individuals
Region15q26.1
Chromosome idchr15
Chromosome position92387181
Reported geneST8SIA2
Mapped geneNPM1P5 - ST8SIA2
Upstream gene id4874
Downstream gene id8128
SNP gene ids
Upstream gene distance99947
Downstream gene distance6729
SNP risk allelers17702901-A
SNPsrs17702901
Merged0
SNP id current17702901
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000007
Pvalue mlog7.15490195998574
P value text
Or beta6.64
%95 Ci[4.23-9.05] unit decrease
PlatformIllumina [1943170] (imputed)
CNVN
Mapped traitgastric bypass, body weight loss
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005244, http://www.ebi.ac.uk/efo/EFO_0005245
Study accessionGCST001991