Human SNP ID | rs17695092 |
---|---|
Human chromosome | chr5 |
Human SNP position | 173910850 |
Pig chromosome | chr16 |
Pig SNP position | 54857402 |
PubMed ID | 23128233 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/23128233 |
Study | Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. |
Disease/Trait | Crohn__s disease |
Initial sample | Up to 12,924 European ancestry cases, up to 21,442 European ancestry controls |
Replication sample | Up to 25,683 European ancestry cases, up to 17,015 European ancestry controls |
Region | 5q35.2 |
Chromosome id | chr5 |
Chromosome position | 173910850 |
Reported gene | CPEB4 |
Mapped gene | CPEB4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 80315 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17695092-T |
SNPs | rs17695092 |
Merged | 0 |
SNP id current | 17695092 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.703 |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | |
Or beta | 1.095 |
%95 Ci | [1.055-1.136] |
Platform | Affymetrix, Illumina [1230000] (imputed) |
CNV | N |
Mapped trait | Crohn__s disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000384 |
Study accession | GCST001729 |