Human SNP ID | rs17691453 |
---|---|
Human chromosome | chr15 |
Human SNP position | 39251745 |
Pig chromosome | chr1 |
Pig SNP position | 147352983 |
PubMed ID | 23934736 |
---|---|
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/23934736 |
Study | Genome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study. |
Disease/Trait | Metabolite levels (Dihydroxy docosatrienoic acid) |
Initial sample | 1,260 African American individuals |
Replication sample | NA |
Region | 15q14 |
Chromosome id | chr15 |
Chromosome position | 39251745 |
Reported gene | C15orf54 |
Mapped gene | C15orf54 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 400360 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17691453-C |
SNPs | rs17691453 |
Merged | 0 |
SNP id current | 17691453 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 0.1 |
%95 Ci | [0.06-0.15] unit increase |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | dihydroxy docosatrienoic acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005275 |
Study accession | GCST002120 |