SNP Detail For rs17691453
1.Mapping Information
Human SNP ID rs17691453
Human chromosome chr15
Human SNP position 39251745
Pig chromosome chr1
Pig SNP position 147352983
2.Annotation Information
PubMed ID23934736
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/23934736
StudyGenome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study.
Disease/TraitMetabolite levels (Dihydroxy docosatrienoic acid)
Initial sample1,260 African American individuals
Replication sampleNA
Region15q14
Chromosome idchr15
Chromosome position39251745
Reported geneC15orf54
Mapped geneC15orf54
Upstream gene id
Downstream gene id
SNP gene ids400360
Upstream gene distance
Downstream gene distance
SNP risk allelers17691453-C
SNPsrs17691453
Merged0
SNP id current17691453
Contextintron_variant
Intergenic0
Allele frequency
P value0.000001
Pvalue mlog6
P value text
Or beta0.1
%95 Ci[0.06-0.15] unit increase
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitdihydroxy docosatrienoic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005275
Study accessionGCST002120