Human SNP ID | rs17689882 |
---|---|
Human chromosome | chr17 |
Human SNP position | 45829462 |
Pig chromosome | chr12 |
Pig SNP position | 17373694 |
PubMed ID | 25607358 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25607358 |
Study | Common genetic variants influence human subcortical brain structures. |
Disease/Trait | Subcortical brain region volumes |
Initial sample | up to 13,171 European ancestry individuals |
Replication sample | up to 15,130 European ancestry individuals, 545 Japanese ancestry individuals, 736 Mexican American individuals |
Region | 17q21.31 |
Chromosome id | chr17 |
Chromosome position | 45829462 |
Reported gene | CRHR1 |
Mapped gene | MGC57346-CRHR1, CRHR1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 104909134, 1394 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17689882-A |
SNPs | rs17689882 |
Merged | 0 |
SNP id current | 17689882 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.22 |
P value | 0.000000008 |
Pvalue mlog | 8.09691001300805 |
P value text | (Intracranial volume, EA) |
Or beta | 13460.47 |
%95 Ci | [8891.61-18029.33] mm3 decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | intra cranial volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004886 |
Study accession | GCST002756 |