SNP Detail For rs17688601
1.Mapping Information
Human SNP ID rs17688601
Human chromosome chr7
Human SNP position 40827064
Pig chromosome chr18
Pig SNP position 58862216
2.Annotation Information
PubMed ID26098869
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26098869
StudyCommon variation at 2p13.3, 3q29, 7p13 and 17q25.1 associated with susceptibility to pancreatic cancer.
Disease/TraitPancreatic cancer
Initial sample7,638 cases, 7,364 controls
Replication sample2,287 cases, 4,205 controls
Region7p14.1
Chromosome idchr7
Chromosome position40827064
Reported geneSUGCT
Mapped geneSUGCT
Upstream gene id
Downstream gene id
SNP gene ids79783
Upstream gene distance
Downstream gene distance
SNP risk allelers17688601-C
SNPsrs17688601
Merged
SNP id current17688601
Contextintron_variant
Intergenic0
Allele frequency0.737
P value0.00000001
Pvalue mlog8
P value text
Or beta1.1363636
%95 Ci[1.09-1.19]
PlatformIllumina [866891] (imputed)
CNVN
Mapped traitpancreatic carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002618
Study accessionGCST002991