Human SNP ID | rs17688601 |
---|---|
Human chromosome | chr7 |
Human SNP position | 40827064 |
Pig chromosome | chr18 |
Pig SNP position | 58862216 |
PubMed ID | 26098869 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26098869 |
Study | Common variation at 2p13.3, 3q29, 7p13 and 17q25.1 associated with susceptibility to pancreatic cancer. |
Disease/Trait | Pancreatic cancer |
Initial sample | 7,638 cases, 7,364 controls |
Replication sample | 2,287 cases, 4,205 controls |
Region | 7p14.1 |
Chromosome id | chr7 |
Chromosome position | 40827064 |
Reported gene | SUGCT |
Mapped gene | SUGCT |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 79783 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17688601-C |
SNPs | rs17688601 |
Merged | |
SNP id current | 17688601 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.737 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | 1.1363636 |
%95 Ci | [1.09-1.19] |
Platform | Illumina [866891] (imputed) |
CNV | N |
Mapped trait | pancreatic carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002618 |
Study accession | GCST002991 |