Human SNP ID | rs17667932 |
---|---|
Human chromosome | chr8 |
Human SNP position | 117537137 |
Pig chromosome | chr4 |
Pig SNP position | 22444919 |
PubMed ID | 22446961 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22446961 |
Study | Two new susceptibility loci for Kawasaki disease identified through genome-wide association analysis. |
Disease/Trait | Kawasaki disease |
Initial sample | 622 Han Chinese ancestry cases, 1,107 Han Chinese ancestry controls |
Replication sample | 261 Han Chinese ancestry cases, 550 Han Chinese ancestry controls |
Region | 8q24.11 |
Chromosome id | chr8 |
Chromosome position | 117537137 |
Reported gene | MED30 |
Mapped gene | MED30 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 90390 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17667932-G |
SNPs | rs17667932 |
Merged | 0 |
SNP id current | 17667932 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.019 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | |
Or beta | 2.368 |
%95 Ci | [1.680-3.337] |
Platform | Affymetrix [716935] |
CNV | N |
Mapped trait | mucocutaneous lymph node syndrome |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004246 |
Study accession | GCST001456 |