Human SNP ID | rs17664743 |
---|---|
Human chromosome | chr7 |
Human SNP position | 50214301 |
Pig chromosome | chr9 |
Pig SNP position | 149931245 |
PubMed ID | 23817569 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23817569 |
Study | A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci. |
Disease/Trait | Self-reported allergy |
Initial sample | 53,862 European ancestry individuals |
Replication sample | NA |
Region | 7p12.2 |
Chromosome id | chr7 |
Chromosome position | 50214301 |
Reported gene | intergenic |
Mapped gene | C7orf72 - IKZF1 |
Upstream gene id | 100130988 |
Downstream gene id | 10320 |
SNP gene ids | |
Upstream gene distance | 55045 |
Downstream gene distance | 89164 |
SNP risk allele | rs17664743-A |
SNPs | rs17664743 |
Merged | 0 |
SNP id current | 17664743 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.2244 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 0.0665 |
%95 Ci | [0.038-0.095] unit increase |
Platform | Illumina [2400000] (imputed) |
CNV | N |
Mapped trait | allergy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003785 |
Study accession | GCST002083 |