SNP Detail For rs17662217
1.Mapping Information
Human SNP ID rs17662217
Human chromosome chr17
Human SNP position 34535171
Pig chromosome chr12
Pig SNP position 42196116
2.Annotation Information
PubMed ID25656473
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25656473
StudyGenome-wide association study of lymphoblast cell viability after clozapine exposure.
Disease/TraitClozapine-induced cytotoxicity
Initial sample90 European ancestry lymphoblast cell lines
Replication sampleNA
Region17q12
Chromosome idchr17
Chromosome position34535171
Reported geneintergenic
Mapped geneLOC105371739 - C17orf102
Upstream gene id105371739
Downstream gene id400591
SNP gene ids
Upstream gene distance52159
Downstream gene distance38952
SNP risk allelers17662217-?
SNPsrs17662217
Merged0
SNP id current17662217
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text(AUC)
Or beta
%95 Ci
PlatformNR [2092490]
CNVN
Mapped traitcytotoxicity measurement, response to clozapine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006952, http://purl.obolibrary.org/obo/GO_0097338
Study accessionGCST002777