Human SNP ID | rs17655948 |
---|---|
Human chromosome | chr13 |
Human SNP position | 105415571 |
Pig chromosome | chr11 |
Pig SNP position | 80685205 |
PubMed ID | 24024966 |
---|---|
Journal | J Clin Periodontol |
Link | www.ncbi.nlm.nih.gov/pubmed/24024966 |
Study | Genome-wide association study of chronic periodontitis in a general German population. |
Disease/Trait | Periodontitis (DPAL) |
Initial sample | up to 2,501 European ancestry individuals |
Replication sample | NA |
Region | 13q33.2 |
Chromosome id | chr13 |
Chromosome position | 105415571 |
Reported gene | DAOA |
Mapped gene | LOC105370344 - DAOA-AS1 |
Upstream gene id | 105370344 |
Downstream gene id | 282706 |
SNP gene ids | |
Upstream gene distance | 1347 |
Downstream gene distance | 43484 |
SNP risk allele | rs17655948-T |
SNPs | rs17655948 |
Merged | 0 |
SNP id current | 17655948 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.64 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (Age 20-60 years) |
Or beta | 0.1638 |
%95 Ci | [0.093-0.234] unit increase |
Platform | Affymetrix, Illumina [up to 17585496] (imputed) |
CNV | N |
Mapped trait | periodontitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000649 |
Study accession | GCST002129 |