Human SNP ID | rs17646946 |
---|---|
Human chromosome | chr1 |
Human SNP position | 152090291 |
Pig chromosome | chr4 |
Pig SNP position | 106137613 |
PubMed ID | 20585627 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20585627 |
Study | Web-based, participant-driven studies yield novel genetic associations for common traits. |
Disease/Trait | Common traits (Other) |
Initial sample | 9,126 European ancestry individuals |
Replication sample | NA |
Region | 1q21.3 |
Chromosome id | chr1 |
Chromosome position | 152090291 |
Reported gene | TCHH |
Mapped gene | TCHHL1 - TCHH |
Upstream gene id | 126637 |
Downstream gene id | 7062 |
SNP gene ids | |
Upstream gene distance | 1227 |
Downstream gene distance | 16026 |
SNP risk allele | rs17646946-A |
SNPs | rs17646946 |
Merged | 0 |
SNP id current | 17646946 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.2 |
P value | 2E-42 |
Pvalue mlog | 41.698970004336 |
P value text | (hair curl) |
Or beta | 0.29 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [535076] |
CNV | N |
Mapped trait | hair morphology |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005038 |
Study accession | GCST000706 |