SNP Detail For rs17645023
1.Mapping Information
Human SNP ID rs17645023
Human chromosome chr17
Human SNP position 66920916
Pig chromosome chr12
Pig SNP position 13725291
2.Annotation Information
PubMed ID21057379
JournalPsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21057379
StudyCase-case genome-wide association analysis shows markers differentially associated with schizophrenia and bipolar disorder and implicates calcium channel genes.
Disease/TraitBipolar disorder and schizophrenia
Initial sample506 European ancestry bipolar 1 disorder cases, 523 European ancestry schizophrenia cases, 505 European ancestry controls
Replication sampleNA
Region17q24.2
Chromosome idchr17
Chromosome position66920916
Reported geneCACNG5
Mapped geneCACNG5 - CACNG4
Upstream gene id27091
Downstream gene id27092
SNP gene ids
Upstream gene distance33620
Downstream gene distance43948
SNP risk allelers17645023-?
SNPsrs17645023
Merged0
SNP id current17645023
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000006
Pvalue mlog6.22184874961635
P value text
Or beta
%95 Ci
PlatformAffymetrix [302482]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000862