Human SNP ID | rs17645023 |
---|---|
Human chromosome | chr17 |
Human SNP position | 66920916 |
Pig chromosome | chr12 |
Pig SNP position | 13725291 |
PubMed ID | 21057379 |
---|---|
Journal | Psychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21057379 |
Study | Case-case genome-wide association analysis shows markers differentially associated with schizophrenia and bipolar disorder and implicates calcium channel genes. |
Disease/Trait | Bipolar disorder and schizophrenia |
Initial sample | 506 European ancestry bipolar 1 disorder cases, 523 European ancestry schizophrenia cases, 505 European ancestry controls |
Replication sample | NA |
Region | 17q24.2 |
Chromosome id | chr17 |
Chromosome position | 66920916 |
Reported gene | CACNG5 |
Mapped gene | CACNG5 - CACNG4 |
Upstream gene id | 27091 |
Downstream gene id | 27092 |
SNP gene ids | |
Upstream gene distance | 33620 |
Downstream gene distance | 43948 |
SNP risk allele | rs17645023-? |
SNPs | rs17645023 |
Merged | 0 |
SNP id current | 17645023 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [302482] |
CNV | N |
Mapped trait | mental or behavioural disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000677 |
Study accession | GCST000862 |