Human SNP ID | rs17636747 |
---|---|
Human chromosome | chr2 |
Human SNP position | 105261413 |
Pig chromosome | chr3 |
Pig SNP position | 51796432 |
PubMed ID | 23551011 |
---|---|
Journal | Ann Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23551011 |
Study | Genome-wide association study of pre-eclampsia detects novel maternal single nucleotide polymorphisms and copy-number variants in subsets of the Hyperglycemia and Adverse Pregnancy Outcome (HAPO) study cohort. |
Disease/Trait | Preeclampsia |
Initial sample | 21 Afro-Caribbean cases, 1,010 Afro-Caribbean controls, 50 European ancestry cases, 1,202 European ancestry controls, 62 Hispanic cases, 658 Hispanic controls |
Replication sample | NA |
Region | 2q12.1 |
Chromosome id | chr2 |
Chromosome position | 105261413 |
Reported gene | TGFBRAP1 |
Mapped gene | TGFBRAP1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9392 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17636747-? |
SNPs | rs17636747 |
Merged | 0 |
SNP id current | 17636747 |
Context | downstream_gene_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (Hispanic) |
Or beta | 8.35 |
%95 Ci | [3.41-20.46] |
Platform | Illumina [2485249] (imputed) |
CNV | N |
Mapped trait | preeclampsia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000668 |
Study accession | GCST001949 |