Human SNP ID | rs17624523 |
---|---|
Human chromosome | chr2 |
Human SNP position | 104542180 |
Pig chromosome | JH118663-1 |
Pig SNP position | 19605 |
PubMed ID | 23006423 |
---|---|
Journal | BMC Cancer |
Link | www.ncbi.nlm.nih.gov/pubmed/23006423 |
Study | Genetic association with overall survival of taxane-treated lung cancer patients - A genome-wide association study in human lymphoblastoid cell lines followed by a clinical association study. |
Disease/Trait | Response to taxane treatment (docetaxel) |
Initial sample | 96 African American lymphoblastoid cell lines, 96 European ancestry lymphoblastoid cell lines, 96 Han Chinese ancestry lymphoblastoid cell lines |
Replication sample | NA |
Region | 2q12.1 |
Chromosome id | chr2 |
Chromosome position | 104542180 |
Reported gene | POU3F3 |
Mapped gene | LINC01102 - LOC105373524 |
Upstream gene id | 150568 |
Downstream gene id | 105373524 |
SNP gene ids | |
Upstream gene distance | 29423 |
Downstream gene distance | 38641 |
SNP risk allele | rs17624523-? |
SNPs | rs17624523 |
Merged | 0 |
SNP id current | 17624523 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 1300000] |
CNV | N |
Mapped trait | response to antineoplastic agent |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0097327 |
Study accession | GCST001692 |