Human SNP ID | rs17622252 |
---|---|
Human chromosome | chr6 |
Human SNP position | 21331676 |
Pig chromosome | chr7 |
Pig SNP position | 17576689 |
PubMed ID | 25827505 |
---|---|
Journal | J Affect Disord |
Link | www.ncbi.nlm.nih.gov/pubmed/25827505 |
Study | Characteristics of Bipolar I patients grouped by externalizing disorders. |
Disease/Trait | Bipolar disorder |
Initial sample | 472 non-externalizing cases, 796 externalizing cases |
Replication sample | 436 non-externalizing European ancestry cases, 801 externalizing European ancestry cases |
Region | 6p22.3 |
Chromosome id | chr6 |
Chromosome position | 21331676 |
Reported gene | CDKAL1 |
Mapped gene | CDKAL1 - LINC00581 |
Upstream gene id | 54901 |
Downstream gene id | 100874531 |
SNP gene ids | |
Upstream gene distance | 99272 |
Downstream gene distance | 154385 |
SNP risk allele | rs17622252-? |
SNPs | rs17622252 |
Merged | 0 |
SNP id current | 17622252 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (externalizing vs. non-externalizing) |
Or beta | 1.658 |
%95 Ci | [NR] |
Platform | Affymetrix [677171] |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST002809 |