SNP Detail For rs17622252
1.Mapping Information
Human SNP ID rs17622252
Human chromosome chr6
Human SNP position 21331676
Pig chromosome chr7
Pig SNP position 17576689
2.Annotation Information
PubMed ID25827505
JournalJ Affect Disord
Linkwww.ncbi.nlm.nih.gov/pubmed/25827505
StudyCharacteristics of Bipolar I patients grouped by externalizing disorders.
Disease/TraitBipolar disorder
Initial sample472 non-externalizing cases, 796 externalizing cases
Replication sample436 non-externalizing European ancestry cases, 801 externalizing European ancestry cases
Region6p22.3
Chromosome idchr6
Chromosome position21331676
Reported geneCDKAL1
Mapped geneCDKAL1 - LINC00581
Upstream gene id54901
Downstream gene id100874531
SNP gene ids
Upstream gene distance99272
Downstream gene distance154385
SNP risk allelers17622252-?
SNPsrs17622252
Merged0
SNP id current17622252
Contextregulatory_region_variant
Intergenic1
Allele frequency
P value0.000004
Pvalue mlog5.39794000867203
P value text(externalizing vs. non-externalizing)
Or beta1.658
%95 Ci[NR]
PlatformAffymetrix [677171]
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST002809