Human SNP ID | rs17606561 |
---|---|
Human chromosome | chr6 |
Human SNP position | 10982126 |
Pig chromosome | chr7 |
Pig SNP position | 7978184 |
PubMed ID | 22359512 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22359512 |
Study | Genome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations. |
Disease/Trait | Phospholipid levels (plasma) |
Initial sample | 4,034 European ancestry individuals |
Replication sample | NA |
Region | 6p24.2 |
Chromosome id | chr6 |
Chromosome position | 10982126 |
Reported gene | ELOVL2 |
Mapped gene | ELOVL2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54898 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17606561-? |
SNPs | rs17606561 |
Merged | 0 |
SNP id current | 17606561 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000000001 |
Pvalue mlog | 11 |
P value text | (proportions) |
Or beta | 0 |
%95 Ci | [0.80-1.10] % increase |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | phospholipid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004639 |
Study accession | GCST001414 |