SNP Detail For rs17606561
1.Mapping Information
Human SNP ID rs17606561
Human chromosome chr6
Human SNP position 10982126
Pig chromosome chr7
Pig SNP position 7978184
2.Annotation Information
PubMed ID22359512
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22359512
StudyGenome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations.
Disease/TraitPhospholipid levels (plasma)
Initial sample4,034 European ancestry individuals
Replication sampleNA
Region6p24.2
Chromosome idchr6
Chromosome position10982126
Reported geneELOVL2
Mapped geneELOVL2
Upstream gene id
Downstream gene id
SNP gene ids54898
Upstream gene distance
Downstream gene distance
SNP risk allelers17606561-?
SNPsrs17606561
Merged0
SNP id current17606561
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.00000000001
Pvalue mlog11
P value text(proportions)
Or beta0
%95 Ci[0.80-1.10] % increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitphospholipid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004639
Study accessionGCST001414