Human SNP ID | rs17589516 |
---|---|
Human chromosome | chr6 |
Human SNP position | 38068644 |
Pig chromosome | chr7 |
Pig SNP position | 38864313 |
PubMed ID | 21901158 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/21901158 |
Study | Genome-wide detection of allele specific copy number variation associated with insulin resistance in African Americans from the HyperGEN study. |
Disease/Trait | Insulin resistance/response |
Initial sample | 1,040 African American individuals |
Replication sample | NA |
Region | 6p21.2 |
Chromosome id | chr6 |
Chromosome position | 38068644 |
Reported gene | ZFAND3 |
Mapped gene | ZFAND3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 60685 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17589516-C |
SNPs | rs17589516 |
Merged | 0 |
SNP id current | 17589516 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.02 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (HOMA-IR) |
Or beta | 45 |
%95 Ci | [24.00 - 69.00] % increase |
Platform | Affymetrix [872243] |
CNV | N |
Mapped trait | insulin resistance |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002614 |
Study accession | GCST001208 |