SNP Detail For rs17589290
1.Mapping Information
Human SNP ID rs17589290
Human chromosome chr4
Human SNP position 112002081
Pig chromosome chr8
Pig SNP position 118669615
2.Annotation Information
PubMed ID21347282
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21347282
StudyGenome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project.
Disease/TraitHypertension
Initial sample4,069 African American cases, 3,848 African American controls
Replication sample1,372 African American cases, 1,482 African American controls
Region4q25
Chromosome idchr4
Chromosome position112002081
Reported geneintergenic
Mapped geneLOC105377369 - RPS12P8
Upstream gene id105377369
Downstream gene id402184
SNP gene ids
Upstream gene distance71204
Downstream gene distance114409
SNP risk allelers17589290-?
SNPsrs17589290
Merged0
SNP id current17589290
Contextintron_variant
Intergenic1
Allele frequency0.04
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.4285715
%95 Ci[1.22-1.67]
PlatformAffymetrix [~ 2740000] (imputed)
CNVN
Mapped traithypertension
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000537
Study accessionGCST000973