Human SNP ID | rs17589290 |
---|---|
Human chromosome | chr4 |
Human SNP position | 112002081 |
Pig chromosome | chr8 |
Pig SNP position | 118669615 |
PubMed ID | 21347282 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21347282 |
Study | Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project. |
Disease/Trait | Hypertension |
Initial sample | 4,069 African American cases, 3,848 African American controls |
Replication sample | 1,372 African American cases, 1,482 African American controls |
Region | 4q25 |
Chromosome id | chr4 |
Chromosome position | 112002081 |
Reported gene | intergenic |
Mapped gene | LOC105377369 - RPS12P8 |
Upstream gene id | 105377369 |
Downstream gene id | 402184 |
SNP gene ids | |
Upstream gene distance | 71204 |
Downstream gene distance | 114409 |
SNP risk allele | rs17589290-? |
SNPs | rs17589290 |
Merged | 0 |
SNP id current | 17589290 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.04 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.4285715 |
%95 Ci | [1.22-1.67] |
Platform | Affymetrix [~ 2740000] (imputed) |
CNV | N |
Mapped trait | hypertension |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000537 |
Study accession | GCST000973 |