Human SNP ID | rs17586674 |
---|---|
Human chromosome | chr5 |
Human SNP position | 2335467 |
Pig chromosome | chr16 |
Pig SNP position | 85199711 |
PubMed ID | 20125193 |
---|---|
Journal | Eur J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20125193 |
Study | Common genetic variation and performance on standardized cognitive tests. |
Disease/Trait | Cognitive performance |
Initial sample | Up to 813 European ancestry individuals, up to 167 East Asian ancestry individuals, up to 7 Hispanic/Latin American individuals, up to 74 South Asian ancestry individuals |
Replication sample | NA |
Region | 5p15.33 |
Chromosome id | chr5 |
Chromosome position | 2335467 |
Reported gene | AC138982.2 |
Mapped gene | LOC100506858 - IRX2 |
Upstream gene id | 100506858 |
Downstream gene id | 153572 |
SNP gene ids | |
Upstream gene distance | 23266 |
Downstream gene distance | 406396 |
SNP risk allele | rs17586674-? |
SNPs | rs17586674 |
Merged | 0 |
SNP id current | 17586674 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (Colorword) |
Or beta | |
%95 Ci | |
Platform | Illumina [up to 563855] |
CNV | N |
Mapped trait | neuropsychological test |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003926 |
Study accession | GCST000579 |