SNP Detail For rs17586674
1.Mapping Information
Human SNP ID rs17586674
Human chromosome chr5
Human SNP position 2335467
Pig chromosome chr16
Pig SNP position 85199711
2.Annotation Information
PubMed ID20125193
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20125193
StudyCommon genetic variation and performance on standardized cognitive tests.
Disease/TraitCognitive performance
Initial sampleUp to 813 European ancestry individuals, up to 167 East Asian ancestry individuals, up to 7 Hispanic/Latin American individuals, up to 74 South Asian ancestry individuals
Replication sampleNA
Region5p15.33
Chromosome idchr5
Chromosome position2335467
Reported geneAC138982.2
Mapped geneLOC100506858 - IRX2
Upstream gene id100506858
Downstream gene id153572
SNP gene ids
Upstream gene distance23266
Downstream gene distance406396
SNP risk allelers17586674-?
SNPsrs17586674
Merged0
SNP id current17586674
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(Colorword)
Or beta
%95 Ci
PlatformIllumina [up to 563855]
CNVN
Mapped traitneuropsychological test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003926
Study accessionGCST000579