Human SNP ID | rs17585887 |
---|---|
Human chromosome | chr6 |
Human SNP position | 139514361 |
Pig chromosome | chr1 |
Pig SNP position | 28172527 |
PubMed ID | 25961943 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25961943 |
Study | The impact of low-frequency and rare variants on lipid levels. |
Disease/Trait | Triglycerides |
Initial sample | up to 62,166 European ancestry individuals |
Replication sample | NA |
Region | 6q24.1 |
Chromosome id | chr6 |
Chromosome position | 139514361 |
Reported gene | CITED2 |
Mapped gene | LOC645434 - LOC105378023 |
Upstream gene id | 645434 |
Downstream gene id | 105378023 |
SNP gene ids | |
Upstream gene distance | 39765 |
Downstream gene distance | 11143 |
SNP risk allele | rs17585887-T |
SNPs | rs17585887 |
Merged | |
SNP id current | 17585887 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.44 |
P value | 0.00000000007 |
Pvalue mlog | 10.1549019599857 |
P value text | |
Or beta | 0.039 |
%95 Ci | [0.027-0.051] s.d. increase |
Platform | Affymetrix, Illumina, Perlegen [up to 9657952] (imputed) |
CNV | N |
Mapped trait | triglyceride measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004530 |
Study accession | GCST002897 |