Human SNP ID | rs17563 |
---|---|
Human chromosome | chr14 |
Human SNP position | 53950804 |
Pig chromosome | chr1 |
Pig SNP position | 203775001 |
PubMed ID | 23704328 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23704328 |
Study | Genome-wide association study of primary tooth eruption identifies pleiotropic loci associated with height and craniofacial distances. |
Disease/Trait | Primary tooth development (time to first tooth eruption) |
Initial sample | 11,118 European ancestry individuals |
Replication sample | |
Region | 14q22.2 |
Chromosome id | chr14 |
Chromosome position | 53950804 |
Reported gene | BMP4 |
Mapped gene | BMP4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 652 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17563-G |
SNPs | rs17563 |
Merged | 0 |
SNP id current | 17563 |
Context | stop_lost |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000000000000009 |
Pvalue mlog | 16.0457574905606 |
P value text | |
Or beta | 0.239 |
%95 Ci | [0.18-0.3] unit decrease |
Platform | Illumina [2446724] (imputed) |
CNV | N |
Mapped trait | tooth eruption |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0044691 |
Study accession | GCST002030 |