Human SNP ID | rs17548918 |
---|---|
Human chromosome | chr3 |
Human SNP position | 21338599 |
Pig chromosome | chr13 |
Pig SNP position | 9422217 |
PubMed ID | 25390645 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25390645 |
Study | Genome-wide and gene-based association studies of anxiety disorders in European and african american samples. |
Disease/Trait | Anxiety disorder |
Initial sample | 324 African American cases, 273 African American controls, 757 European ancestry cases, 940 European ancestry controls |
Replication sample | NA |
Region | 3p24.3 |
Chromosome id | chr3 |
Chromosome position | 21338599 |
Reported gene | intergenic |
Mapped gene | LOC105376988 - VENTXP7 |
Upstream gene id | 105376988 |
Downstream gene id | 391518 |
SNP gene ids | |
Upstream gene distance | 117272 |
Downstream gene distance | 67127 |
SNP risk allele | rs17548918-C |
SNPs | rs17548918 |
Merged | 0 |
SNP id current | 17548918 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (AA, factor score analysis) |
Or beta | 0.26 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix [up to 730090] |
CNV | N |
Mapped trait | anxiety disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006788 |
Study accession | GCST002696 |