SNP Detail For rs17541203
1.Mapping Information
Human SNP ID rs17541203
Human chromosome chr1
Human SNP position 57160259
Pig chromosome chr6
Pig SNP position 142947796
2.Annotation Information
PubMed ID23449627
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23449627
StudyGenome-wide association and longitudinal analyses reveal genetic loci linking pubertal height growth, pubertal timing and childhood adiposity.
Disease/TraitPubertal anthropometrics
Initial sample7,161 European ancestry males, 6,879 European ancestry females
Replication sample5,133 European ancestry males, 4,577 European ancestry females
Region1p32.2
Chromosome idchr1
Chromosome position57160259
Reported geneDAB1
Mapped geneDAB1
Upstream gene id
Downstream gene id
SNP gene ids1600
Upstream gene distance
Downstream gene distance
SNP risk allelers17541203-C
SNPsrs17541203
Merged0
SNP id current17541203
Contextintron_variant
Intergenic0
Allele frequency0.082
P value0.000002
Pvalue mlog5.69897000433601
P value text(Single Height-female)
Or beta0.13
%95 Ci[0.073-0.187] unit decrease
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001875