SNP Detail For rs17531088
1.Mapping Information
Human SNP ID rs17531088
Human chromosome chr3
Human SNP position 175175985
Pig chromosome chr13
Pig SNP position 122337408
2.Annotation Information
PubMed ID19132087
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19132087
StudyA genome-wide association study identifies novel and functionally related susceptibility Loci for Kawasaki disease.
Disease/TraitKawasaki disease
Initial sample107 European ancestry cases, 134 European ancestry controls
Replication sample583 European ancestry cases, 1,357 European ancestry controls from 583 families
Region3q26.31
Chromosome idchr3
Chromosome position175175985
Reported geneNAALADL2
Mapped geneNAALADL2
Upstream gene id
Downstream gene id
SNP gene ids254827
Upstream gene distance
Downstream gene distance
SNP risk allelers17531088-T
SNPsrs17531088
Merged0
SNP id current17531088
Contextintron_variant
Intergenic0
Allele frequency0.44
P value0.000001
Pvalue mlog6
P value text
Or beta1.43
%95 Ci[1.32-1.53]
PlatformAffymetrix [223922]
CNVN
Mapped traitmucocutaneous lymph node syndrome
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004246
Study accessionGCST000314