Human SNP ID | rs17531088 |
---|---|
Human chromosome | chr3 |
Human SNP position | 175175985 |
Pig chromosome | chr13 |
Pig SNP position | 122337408 |
PubMed ID | 19132087 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19132087 |
Study | A genome-wide association study identifies novel and functionally related susceptibility Loci for Kawasaki disease. |
Disease/Trait | Kawasaki disease |
Initial sample | 107 European ancestry cases, 134 European ancestry controls |
Replication sample | 583 European ancestry cases, 1,357 European ancestry controls from 583 families |
Region | 3q26.31 |
Chromosome id | chr3 |
Chromosome position | 175175985 |
Reported gene | NAALADL2 |
Mapped gene | NAALADL2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 254827 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17531088-T |
SNPs | rs17531088 |
Merged | 0 |
SNP id current | 17531088 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.44 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 1.43 |
%95 Ci | [1.32-1.53] |
Platform | Affymetrix [223922] |
CNV | N |
Mapped trait | mucocutaneous lymph node syndrome |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004246 |
Study accession | GCST000314 |