SNP Detail For rs17507884
1.Mapping Information
Human SNP ID rs17507884
Human chromosome chr1
Human SNP position 113510496
Pig chromosome chr4
Pig SNP position 117160730
2.Annotation Information
PubMed ID26545630
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/26545630
StudyA potential endophenotype for Alzheimer__s disease: cerebrospinal fluid clusterin.
Disease/TraitCerebrospinal fluid clusterin levels
Initial sample300 Alzheimer__s disease cases, 373 controls
Replication sampleNA
Region1p13.2
Chromosome idchr1
Chromosome position113510496
Reported geneMAGI3
Mapped geneMAGI3
Upstream gene id
Downstream gene id
SNP gene ids260425
Upstream gene distance
Downstream gene distance
SNP risk allelers17507884-?
SNPsrs17507884
Merged
SNP id current17507884
Contextintron_variant
Intergenic0
Allele frequency
P value0.000001
Pvalue mlog6
P value text
Or beta0.466
%95 Ci[NR] unit decrease
PlatformIllumina [5970354] (imputed)
CNVN
Mapped traitcerebrospinal fluid clusterin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007657
Study accessionGCST003134