SNP Detail For rs17496827
1.Mapping Information
Human SNP ID rs17496827
Human chromosome chr2
Human SNP position 222488727
Pig chromosome chr15
Pig SNP position 137936752
2.Annotation Information
PubMed ID23568457
JournalInt J Eat Disord
Linkwww.ncbi.nlm.nih.gov/pubmed/23568457
StudyGenetic variants associated with disordered eating.
Disease/TraitAnorexia nervosa
Initial sample237 European ancestry female cases, 2,287 European ancestry female controls
Replication sampleNA
Region2q36.1
Chromosome idchr2
Chromosome position222488727
Reported geneSGPP2
Mapped geneSGPP2
Upstream gene id
Downstream gene id
SNP gene ids130367
Upstream gene distance
Downstream gene distance
SNP risk allelers17496827-C
SNPsrs17496827
Merged0
SNP id current17496827
Contextintron_variant
Intergenic0
Allele frequency0.55
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta0.042
%95 Ci[0.024-0.06] unit decrease
PlatformIllumina [6150213] (imputed)
CNVN
Mapped traitanorexia nervosa
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004215
Study accessionGCST001961