Human SNP ID | rs17496827 |
---|---|
Human chromosome | chr2 |
Human SNP position | 222488727 |
Pig chromosome | chr15 |
Pig SNP position | 137936752 |
PubMed ID | 23568457 |
---|---|
Journal | Int J Eat Disord |
Link | www.ncbi.nlm.nih.gov/pubmed/23568457 |
Study | Genetic variants associated with disordered eating. |
Disease/Trait | Anorexia nervosa |
Initial sample | 237 European ancestry female cases, 2,287 European ancestry female controls |
Replication sample | NA |
Region | 2q36.1 |
Chromosome id | chr2 |
Chromosome position | 222488727 |
Reported gene | SGPP2 |
Mapped gene | SGPP2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 130367 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17496827-C |
SNPs | rs17496827 |
Merged | 0 |
SNP id current | 17496827 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.55 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 0.042 |
%95 Ci | [0.024-0.06] unit decrease |
Platform | Illumina [6150213] (imputed) |
CNV | N |
Mapped trait | anorexia nervosa |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004215 |
Study accession | GCST001961 |