SNP Detail For rs17492380
1.Mapping Information
Human SNP ID rs17492380
Human chromosome chr11
Human SNP position 116568134
Pig chromosome chr9
Pig SNP position 49052259
2.Annotation Information
PubMed ID25656473
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25656473
StudyGenome-wide association study of lymphoblast cell viability after clozapine exposure.
Disease/TraitClozapine-induced cytotoxicity
Initial sample90 European ancestry lymphoblast cell lines
Replication sampleNA
Region11q23.3
Chromosome idchr11
Chromosome position116568134
Reported geneintergenic
Mapped geneLOC105369513 - LOC101929011
Upstream gene id105369513
Downstream gene id101929011
SNP gene ids
Upstream gene distance487078
Downstream gene distance71288
SNP risk allelers17492380-?
SNPsrs17492380
Merged0
SNP id current17492380
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text(AUC)
Or beta
%95 Ci
PlatformNR [2092490]
CNVN
Mapped traitcytotoxicity measurement, response to clozapine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006952, http://purl.obolibrary.org/obo/GO_0097338
Study accessionGCST002777