SNP Detail For rs1747593
1.Mapping Information
Human SNP ID rs1747593
Human chromosome chr6
Human SNP position 604158
Pig chromosome chr7
Pig SNP position 134476
2.Annotation Information
PubMed ID25865494
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25865494
StudyGenome-wide Analysis of Body Proportion Classifies Height-Associated Variants by Mechanism of Action and Implicates Genes Important for Skeletal Development.
Disease/TraitSitting height ratio
Initial sample3,545 African Americans individuals, 12,965 European ancestry women, 8,625 European ancestry men
Replication sampleNA
Region6p25.3
Chromosome idchr6
Chromosome position604158
Reported geneNR
Mapped geneEXOC2
Upstream gene id
Downstream gene id
SNP gene ids55770
Upstream gene distance
Downstream gene distance
SNP risk allelers1747593-T
SNPsrs1747593
Merged0
SNP id current1747593
Contextintron_variant
Intergenic0
Allele frequency0.037
P value0.000004
Pvalue mlog5.39794000867203
P value text(EA)
Or beta0.118
%95 Ci[0.067-0.169] unit decrease
PlatformAffymetrix, Illumina [up to 10250422] (imputed)
CNVN
Mapped traitsitting height ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007118
Study accessionGCST002843