SNP Detail For rs17461620
1.Mapping Information
Human SNP ID rs17461620
Human chromosome chr9
Human SNP position 86348093
Pig chromosome chr10
Pig SNP position 33044632
2.Annotation Information
PubMed ID25918132
JournalToxicol Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/25918132
StudyGenome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma.
Disease/TraitDiisocyanate-induced asthma
Initial sample74 European ancestry cases, 824 European ancestry controls
Replication sampleNA
Region9q21.33
Chromosome idchr9
Chromosome position86348093
Reported geneZCCHC6, ISCA1, LOC392358
Mapped geneZCCHC6
Upstream gene id
Downstream gene id
SNP gene ids79670
Upstream gene distance
Downstream gene distance
SNP risk allelers17461620-A
SNPsrs17461620
Merged0
SNP id current17461620
Contextintron_variant
Intergenic0
Allele frequency0.157
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta2.34
%95 Ci[1.61-3.41]
PlatformIllumina [1556551]
CNVN
Mapped traitresponse to diisocyanate, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002875