SNP Detail For rs17444059
1.Mapping Information
Human SNP ID rs17444059
Human chromosome chr5
Human SNP position 59264891
Pig chromosome chr16
Pig SNP position 40962287
2.Annotation Information
PubMed ID22610502
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22610502
StudyGenome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
Disease/TraitImmune response to smallpox vaccine (IL-6)
Initial sampleUp to 512 European ancestry individuals, 199 African American individuals
Replication sampleNA
Region5q11.2
Chromosome idchr5
Chromosome position59264891
Reported genePDE4D
Mapped genePDE4D
Upstream gene id
Downstream gene id
SNP gene ids5144
Upstream gene distance
Downstream gene distance
SNP risk allelers17444059-G
SNPsrs17444059
Merged0
SNP id current17444059
Contextintron_variant
Intergenic0
Allele frequency
P value0.00000002
Pvalue mlog7.69897000433601
P value text(AA)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine, cytokine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645, http://www.ebi.ac.uk/efo/EFO_0004873
Study accessionGCST001532