Human SNP ID | rs17420782 |
---|---|
Human chromosome | chr1 |
Human SNP position | 47553550 |
Pig chromosome | chr6 |
Pig SNP position | 151566355 |
PubMed ID | 24047446 |
---|---|
Journal | World J Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/24047446 |
Study | Genome-wide association study of co-occurring anxiety in major depression. |
Disease/Trait | Anxiety in major depressive disorder |
Initial sample | 1,080 European ancestry cases, 442 European ancestry controls |
Replication sample | NA |
Region | 1p33 |
Chromosome id | chr1 |
Chromosome position | 47553550 |
Reported gene | RPL21P24 |
Mapped gene | RPL21P24 - TRABD2B |
Upstream gene id | 100270880 |
Downstream gene id | 388630 |
SNP gene ids | |
Upstream gene distance | 55169 |
Downstream gene distance | 206978 |
SNP risk allele | rs17420782-G |
SNPs | rs17420782 |
Merged | 0 |
SNP id current | 17420782 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.16 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (Quantitative) |
Or beta | 0.55 |
%95 Ci | [NR] unit increase |
Platform | Illumina [471581] |
CNV | N |
Mapped trait | unipolar depression, anxiety |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0005230 |
Study accession | GCST002202 |