SNP Detail For rs1741439
1.Mapping Information
Human SNP ID rs1741439
Human chromosome chr14
Human SNP position 92236252
Pig chromosome chr7
Pig SNP position 120347950
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region14q32.12
Chromosome idchr14
Chromosome position92236252
Reported geneCPSF2
Mapped geneCPSF2 - LOC105370627
Upstream gene id53981
Downstream gene id105370627
SNP gene ids
Upstream gene distance72053
Downstream gene distance68162
SNP risk allelers1741439-A
SNPsrs1741439
Merged0
SNP id current1741439
Contextintergenic_variant
Intergenic1
Allele frequency0.005
P value0.000003
Pvalue mlog5.52287874528033
P value text(Amylin )
Or beta0.04
%95 Ci[NR] pM increase
PlatformIllumina [899892]
CNVN
Mapped traithormone measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004730
Study accessionGCST001762