Human SNP ID | rs1741439 |
---|---|
Human chromosome | chr14 |
Human SNP position | 92236252 |
Pig chromosome | chr7 |
Pig SNP position | 120347950 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 14q32.12 |
Chromosome id | chr14 |
Chromosome position | 92236252 |
Reported gene | CPSF2 |
Mapped gene | CPSF2 - LOC105370627 |
Upstream gene id | 53981 |
Downstream gene id | 105370627 |
SNP gene ids | |
Upstream gene distance | 72053 |
Downstream gene distance | 68162 |
SNP risk allele | rs1741439-A |
SNPs | rs1741439 |
Merged | 0 |
SNP id current | 1741439 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.005 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Amylin ) |
Or beta | 0.04 |
%95 Ci | [NR] pM increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | hormone measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004730 |
Study accession | GCST001762 |