Human SNP ID | rs17412740 |
---|---|
Human chromosome | chr8 |
Human SNP position | 20389247 |
Pig chromosome | chr14 |
Pig SNP position | 4856218 |
PubMed ID | 23551011 |
---|---|
Journal | Ann Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23551011 |
Study | Genome-wide association study of pre-eclampsia detects novel maternal single nucleotide polymorphisms and copy-number variants in subsets of the Hyperglycemia and Adverse Pregnancy Outcome (HAPO) study cohort. |
Disease/Trait | Preeclampsia |
Initial sample | 21 Afro-Caribbean cases, 1,010 Afro-Caribbean controls, 50 European ancestry cases, 1,202 European ancestry controls, 62 Hispanic cases, 658 Hispanic controls |
Replication sample | NA |
Region | 8p21.3 |
Chromosome id | chr8 |
Chromosome position | 20389247 |
Reported gene | LZTS1 |
Mapped gene | LOC105379314 - LOC105379398 |
Upstream gene id | 105379314 |
Downstream gene id | 105379398 |
SNP gene ids | |
Upstream gene distance | 18620 |
Downstream gene distance | 16238 |
SNP risk allele | rs17412740-? |
SNPs | rs17412740 |
Merged | 0 |
SNP id current | 17412740 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Hispanic) |
Or beta | 6.08 |
%95 Ci | [2.88-12.81] |
Platform | Illumina [2485249] (imputed) |
CNV | N |
Mapped trait | preeclampsia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000668 |
Study accession | GCST001949 |