Human SNP ID | rs17396340 |
---|---|
Human chromosome | chr1 |
Human SNP position | 10226118 |
Pig chromosome | chr6 |
Pig SNP position | 64438132 |
PubMed ID | 22139419 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/22139419 |
Study | New gene functions in megakaryopoiesis and platelet formation. |
Disease/Trait | Mean platelet volume |
Initial sample | 16,948 European ancestry individuals, 1,652 Val Borbera individuals |
Replication sample | Up to 18,838 European ancestry individuals |
Region | 1p36.22 |
Chromosome id | chr1 |
Chromosome position | 10226118 |
Reported gene | KIF1B |
Mapped gene | KIF1B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23095 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17396340-A |
SNPs | rs17396340 |
Merged | 0 |
SNP id current | 17396340 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 0.008 |
%95 Ci | [0.0041-0.0119] ln(fl) increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | mean platelet volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004584 |
Study accession | GCST001335 |