Human SNP ID | rs1738475 |
---|---|
Human chromosome | chr1 |
Human SNP position | 23210398 |
Pig chromosome | chr6 |
Pig SNP position | 75174770 |
PubMed ID | 20881960 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20881960 |
Study | Hundreds of variants clustered in genomic loci and biological pathways affect human height. |
Disease/Trait | Height |
Initial sample | 133,653 European ancestry individuals |
Replication sample | 50,074 European ancestry individuals |
Region | 1p36.12 |
Chromosome id | chr1 |
Chromosome position | 23210398 |
Reported gene | HTR1D |
Mapped gene | HTR1D - RPL29P6 |
Upstream gene id | 3352 |
Downstream gene id | 391019 |
SNP gene ids | |
Upstream gene distance | 15669 |
Downstream gene distance | 34331 |
SNP risk allele | rs1738475-C |
SNPs | rs1738475 |
Merged | 0 |
SNP id current | 1738475 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.59 |
P value | 0.000000000003 |
Pvalue mlog | 11.5228787452803 |
P value text | |
Or beta | 0.025 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix, Illumina [2834208] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000817 |