SNP Detail For rs17382119
1.Mapping Information
Human SNP ID rs17382119
Human chromosome chr3
Human SNP position 156891313
Pig chromosome chr13
Pig SNP position 104823339
2.Annotation Information
PubMed ID25656473
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25656473
StudyGenome-wide association study of lymphoblast cell viability after clozapine exposure.
Disease/TraitClozapine-induced cytotoxicity
Initial sample90 European ancestry lymphoblast cell lines
Replication sampleNA
Region3q25.31
Chromosome idchr3
Chromosome position156891313
Reported geneLEKR1
Mapped geneLEKR1
Upstream gene id
Downstream gene id
SNP gene ids389170
Upstream gene distance
Downstream gene distance
SNP risk allelers17382119-?
SNPsrs17382119
Merged0
SNP id current17382119
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text(AUC)
Or beta
%95 Ci
PlatformNR [2092490]
CNVN
Mapped traitcytotoxicity measurement, response to clozapine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006952, http://purl.obolibrary.org/obo/GO_0097338
Study accessionGCST002777