SNP Detail For rs17377726
1.Mapping Information
Human SNP ID rs17377726
Human chromosome chr3
Human SNP position 78847085
Pig chromosome chr13
Pig SNP position 186655917
2.Annotation Information
PubMed ID26480920
JournalInt J Obes (Lond)
Linkwww.ncbi.nlm.nih.gov/pubmed/26480920
StudyGenome-wide association studies suggest sex-specific loci associated with abdominal and visceral fat.
Disease/TraitVisceral adipose tissue
Initial sample1,152 European ancestry males, 1,361 European ancestry females
Replication sampleNA
Region3p12.3
Chromosome idchr3
Chromosome position78847085
Reported geneROBO1
Mapped geneROBO1
Upstream gene id
Downstream gene id
SNP gene ids6091
Upstream gene distance
Downstream gene distance
SNP risk allelers17377726-A
SNPsrs17377726
Merged0
SNP id current17377726
Contextintron_variant
Intergenic0
Allele frequency0.06
P value0.0000008
Pvalue mlog6.09691001300805
P value text(men)
Or beta0.11
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina [2473256] (imputed)
CNVN
Mapped traitvisceral adipose tissue measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004765
Study accessionGCST003171