Human SNP ID | rs17375901 |
---|---|
Human chromosome | chr1 |
Human SNP position | 11792459 |
Pig chromosome | chr6 |
Pig SNP position | 65779685 |
PubMed ID | 19597492 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19597492 |
Study | Variants in ZFHX3 are associated with atrial fibrillation in individuals of European ancestry. |
Disease/Trait | Atrial fibrillation |
Initial sample | 3,413 cases, 37,105 referents |
Replication sample | 2,145 cases, 4,073 controls |
Region | 1p36.22 |
Chromosome id | chr1 |
Chromosome position | 11792459 |
Reported gene | NPPA, MTHFR |
Mapped gene | MTHFR |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4524 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17375901-T |
SNPs | rs17375901 |
Merged | 0 |
SNP id current | 17375901 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.053 |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | |
Or beta | 1.26 |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | atrial fibrillation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000275 |
Study accession | GCST000445 |