Human SNP ID | rs17373728 |
---|---|
Human chromosome | chr8 |
Human SNP position | 75313281 |
Pig chromosome | chr4 |
Pig SNP position | 66327332 |
PubMed ID | 26305897 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26305897 |
Study | Genome-Wide Association and Trans-ethnic Meta-Analysis for Advanced Diabetic Kidney Disease: Family Investigation of Nephropathy and Diabetes (FIND). |
Disease/Trait | Diabetic kidney disease |
Initial sample | up to 1,564 African American cases, 369 African American diabetic controls, 1,288 African American non-diabetic controls, 538 American Indian ancestry cases, 319 American Indian ancestry diabetic controls, 342 European ancestry cases, 404 European ancest |
Replication sample | NA |
Region | 8q21.13 |
Chromosome id | chr8 |
Chromosome position | 75313281 |
Reported gene | NR |
Mapped gene | CASC9 - HNF4G |
Upstream gene id | 101805492 |
Downstream gene id | 3174 |
SNP gene ids | |
Upstream gene distance | 34392 |
Downstream gene distance | 94400 |
SNP risk allele | rs17373728-C |
SNPs | rs17373728 |
Merged | |
SNP id current | 17373728 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (additive) |
Or beta | 1.34 |
%95 Ci | 1.19-1.52 |
Platform | Affymetrix [NR] |
CNV | N |
Mapped trait | diabetic nephropathy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000401 |
Study accession | GCST003099 |