SNP Detail For rs17373728
1.Mapping Information
Human SNP ID rs17373728
Human chromosome chr8
Human SNP position 75313281
Pig chromosome chr4
Pig SNP position 66327332
2.Annotation Information
PubMed ID26305897
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26305897
StudyGenome-Wide Association and Trans-ethnic Meta-Analysis for Advanced Diabetic Kidney Disease: Family Investigation of Nephropathy and Diabetes (FIND).
Disease/TraitDiabetic kidney disease
Initial sampleup to 1,564 African American cases, 369 African American diabetic controls, 1,288 African American non-diabetic controls, 538 American Indian ancestry cases, 319 American Indian ancestry diabetic controls, 342 European ancestry cases, 404 European ancest
Replication sampleNA
Region8q21.13
Chromosome idchr8
Chromosome position75313281
Reported geneNR
Mapped geneCASC9 - HNF4G
Upstream gene id101805492
Downstream gene id3174
SNP gene ids
Upstream gene distance34392
Downstream gene distance94400
SNP risk allelers17373728-C
SNPsrs17373728
Merged
SNP id current17373728
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(additive)
Or beta1.34
%95 Ci1.19-1.52
PlatformAffymetrix [NR]
CNVN
Mapped traitdiabetic nephropathy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000401
Study accessionGCST003099