SNP Detail For rs17366218
1.Mapping Information
Human SNP ID rs17366218
Human chromosome chr2
Human SNP position 182154019
Pig chromosome chr15
Pig SNP position 97073592
2.Annotation Information
PubMed ID25778476
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25778476
StudyA novel Alzheimer disease locus located near the gene encoding tau protein.
Disease/TraitAlzheimer__s disease in APOE e4+ carriers
Initial sample10,352 cases, 9,207 controls
Replication sample1,250 European ancestry cases, 536 European ancestry controls
Region2q32.1
Chromosome idchr2
Chromosome position182154019
Reported genePDE1A
Mapped genePDE1A
Upstream gene id
Downstream gene id
SNP gene ids5136
Upstream gene distance
Downstream gene distance
SNP risk allelers17366218-A
SNPsrs17366218
Merged0
SNP id current17366218
Contextintron_variant
Intergenic0
Allele frequency0.95
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.5384616
%95 Ci[1.28-1.85]
PlatformNR [NR]
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST002813