SNP Detail For rs1736020
1.Mapping Information
Human SNP ID rs1736020
Human chromosome chr21
Human SNP position 15440233
Pig chromosome chr13
Pig SNP position 190552882
2.Annotation Information
PubMed ID21102463
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21102463
StudyGenome-wide meta-analysis increases to 71 the number of confirmed Crohn__s disease susceptibility loci.
Disease/TraitCrohn__s disease
Initial sample6,333 European ancestry cases, 15,056 European ancestry controls
Replication sample15,694 European ancestry cases, 14,026 European ancestry controls, 414 European ancestry trios
Region21q21.1
Chromosome idchr21
Chromosome position15440233
Reported geneintergenic
Mapped geneLOC101927745
Upstream gene id
Downstream gene id
SNP gene ids101927745
Upstream gene distance
Downstream gene distance
SNP risk allelers1736020-C
SNPsrs1736020
Merged0
SNP id current1736020
Contextintron_variant
Intergenic0
Allele frequency0.579
P value0.000000000009
Pvalue mlog11.0457574905606
P value text
Or beta1.16
%95 Ci[1.11-1.21]
PlatformAffymetrix, Illumina [953241] (imputed)
CNVN
Mapped traitCrohn__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000384
Study accessionGCST000879