Human SNP ID | rs17347800 |
---|---|
Human chromosome | chr7 |
Human SNP position | 18477656 |
Pig chromosome | chr9 |
Pig SNP position | 96676375 |
PubMed ID | 26089329 |
---|---|
Journal | Stroke |
Link | www.ncbi.nlm.nih.gov/pubmed/26089329 |
Study | Meta-Analysis of Genome-Wide Association Studies Identifies Genetic Risk Factors for Stroke in African Americans. |
Disease/Trait | Stroke |
Initial sample | up to 1,592 African American cases, up to 13,154 African American controls |
Replication sample | NA |
Region | 7p21.1 |
Chromosome id | chr7 |
Chromosome position | 18477656 |
Reported gene | HDAC9 |
Mapped gene | HDAC9 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9734 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17347800-A |
SNPs | rs17347800 |
Merged | |
SNP id current | 17347800 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.04 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 0.51 |
%95 Ci | [0.31-0.71] unit increase |
Platform | Affymetrix, Illumina [up to 2600000] (imputed) |
CNV | N |
Mapped trait | stroke |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000712 |
Study accession | GCST002987 |