SNP Detail For rs17331151
1.Mapping Information
Human SNP ID rs17331151
Human chromosome chr3
Human SNP position 52810518
Pig chromosome chr13
Pig SNP position 38121555
2.Annotation Information
PubMed ID22610502
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22610502
StudyGenome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
Disease/TraitImmune reponse to smallpox (secreted IL-2)
Initial sampleUp to 512 European ancestry individuals, up to 199 African American individuals
Replication sampleNA
Region3p21.1
Chromosome idchr3
Chromosome position52810518
Reported geneITIH3, ITIH4
Mapped geneITIH3 - ITIH4
Upstream gene id3699
Downstream gene id3700
SNP gene ids
Upstream gene distance1509
Downstream gene distance2472
SNP risk allelers17331151-A
SNPsrs17331151
Merged0
SNP id current17331151
Contextdownstream_gene_variant
Intergenic1
Allele frequency
P value0.000000002
Pvalue mlog8.69897000433601
P value text(AA)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine, cytokine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645, http://www.ebi.ac.uk/efo/EFO_0004873
Study accessionGCST001535