SNP Detail For rs17303101
1.Mapping Information
Human SNP ID rs17303101
Human chromosome chr9
Human SNP position 116419515
Pig chromosome chr1
Pig SNP position 288241500
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine
Initial sample23,285 European ancestry cases, 95,425 European ancestry controls
Replication sampleNA
Region9q33.1
Chromosome idchr9
Chromosome position116419515
Reported geneintergenic
Mapped genePAPPA - ASTN2
Upstream gene id5069
Downstream gene id23245
SNP gene ids
Upstream gene distance17194
Downstream gene distance5710
SNP risk allelers17303101-A
SNPsrs17303101
Merged0
SNP id current17303101
Contextintergenic_variant
Intergenic1
Allele frequency0.28
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta1.07
%95 Ci[1.04-1.10]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002081