SNP Detail For rs17301739
1.Mapping Information
Human SNP ID rs17301739
Human chromosome chr15
Human SNP position 58438440
Pig chromosome chr1
Pig SNP position 125660754
2.Annotation Information
PubMed ID23535033
JournalAlzheimers Dement
Linkwww.ncbi.nlm.nih.gov/pubmed/23535033
StudyGenome-wide association study of the rate of cognitive decline in Alzheimer__s disease.
Disease/TraitAlzheimer__s disease (cognitive decline)
Initial sample303 European ancestry cases
Replication sample
Region15q21.3
Chromosome idchr15
Chromosome position58438440
Reported geneLIPC
Mapped geneLOC101928694, LIPC
Upstream gene id
Downstream gene id
SNP gene ids101928694, 3990
Upstream gene distance
Downstream gene distance
SNP risk allelers17301739-?
SNPsrs17301739
Merged0
SNP id current17301739
Contextintron_variant
Intergenic0
Allele frequency0.07
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.28
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001915