Human SNP ID | rs17294280 |
---|---|
Human chromosome | chr15 |
Human SNP position | 67175947 |
Pig chromosome | chr1 |
Pig SNP position | 182916134 |
PubMed ID | 24388013 |
---|---|
Journal | J Allergy Clin Immunol |
Link | www.ncbi.nlm.nih.gov/pubmed/24388013 |
Study | Genome-wide association analysis identifies 11 risk variants associated with the asthma with hay fever phenotype. |
Disease/Trait | Asthma and hay fever |
Initial sample | 6,685 European ancestry cases, 14,091 European ancestry controls |
Replication sample | 878 European ancestry cases, 2,455 European ancestry controls |
Region | 15q22.33 |
Chromosome id | chr15 |
Chromosome position | 67175947 |
Reported gene | SMAD3 |
Mapped gene | SMAD3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4088 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17294280-G |
SNPs | rs17294280 |
Merged | 0 |
SNP id current | 17294280 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.23 |
P value | 0.000000004 |
Pvalue mlog | 8.39794000867203 |
P value text | |
Or beta | 1.18 |
%95 Ci | [1.11-1.25] |
Platform | Illumina [up to 4972397] (imputed) |
CNV | N |
Mapped trait | seasonal allergic rhinitis, asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003956, http://www.ebi.ac.uk/efo/EFO_0000270 |
Study accession | GCST002322 |