SNP Detail For rs17294280
1.Mapping Information
Human SNP ID rs17294280
Human chromosome chr15
Human SNP position 67175947
Pig chromosome chr1
Pig SNP position 182916134
2.Annotation Information
PubMed ID24388013
JournalJ Allergy Clin Immunol
Linkwww.ncbi.nlm.nih.gov/pubmed/24388013
StudyGenome-wide association analysis identifies 11 risk variants associated with the asthma with hay fever phenotype.
Disease/TraitAsthma and hay fever
Initial sample6,685 European ancestry cases, 14,091 European ancestry controls
Replication sample878 European ancestry cases, 2,455 European ancestry controls
Region15q22.33
Chromosome idchr15
Chromosome position67175947
Reported geneSMAD3
Mapped geneSMAD3
Upstream gene id
Downstream gene id
SNP gene ids4088
Upstream gene distance
Downstream gene distance
SNP risk allelers17294280-G
SNPsrs17294280
Merged0
SNP id current17294280
Contextintron_variant
Intergenic0
Allele frequency0.23
P value0.000000004
Pvalue mlog8.39794000867203
P value text
Or beta1.18
%95 Ci[1.11-1.25]
PlatformIllumina [up to 4972397] (imputed)
CNVN
Mapped traitseasonal allergic rhinitis, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003956, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002322