SNP Detail For rs17271305
1.Mapping Information
Human SNP ID rs17271305
Human chromosome chr15
Human SNP position 62040781
Pig chromosome chr1
Pig SNP position 121377804
2.Annotation Information
PubMed ID20081857
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20081857
StudyGenetic variation in GIPR influences the glucose and insulin responses to an oral glucose challenge.
Disease/TraitTwo-hour glucose challenge
Initial sample15,234 individuals
Replication sampleup to 30,620 European ancestry individuals
Region15q22.2
Chromosome idchr15
Chromosome position62040781
Reported geneVPS13C
Mapped geneVPS13C
Upstream gene id
Downstream gene id
SNP gene ids54832
Upstream gene distance
Downstream gene distance
SNP risk allelers17271305-G
SNPsrs17271305
Merged0
SNP id current17271305
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000001
Pvalue mlog7
P value text
Or beta0.06
%95 Ci[0.04-0.08 mmol/L increase
PlatformAffymetrix, Illumina [NR]
CNVN
Mapped traitglucose tolerance test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004307
Study accessionGCST000569