SNP Detail For rs17244419
1.Mapping Information
Human SNP ID rs17244419
Human chromosome chr14
Human SNP position 96704738
Pig chromosome chr7
Pig SNP position 125116702
2.Annotation Information
PubMed ID24684796
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24684796
StudyHeritability and genetic association analysis of cognition in the Diabetes Heart Study.
Disease/TraitCognitive function
Initial sample423 type 2 diabetes cases and 127 unaffected siblings from 257 families
Replication sampleNA
Region14q32.2
Chromosome idchr14
Chromosome position96704738
Reported geneVRK1
Mapped geneLOC105370645 - VRK1
Upstream gene id105370645
Downstream gene id7443
SNP gene ids
Upstream gene distance23002
Downstream gene distance92609
SNP risk allelers17244419-T
SNPsrs17244419
Merged0
SNP id current17244419
Contextintergenic_variant
Intergenic1
Allele frequency0.03098
P value0.000008
Pvalue mlog5.09691001300805
P value text(Phonemic Fluency)
Or beta8.6504
%95 Ci[4.89-12.41] unit decrease
PlatformAffymetrix [> 371951] (imputed)
CNVN
Mapped traitcognition
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003925
Study accessionGCST002386