Human SNP ID | rs17244419 |
---|---|
Human chromosome | chr14 |
Human SNP position | 96704738 |
Pig chromosome | chr7 |
Pig SNP position | 125116702 |
PubMed ID | 24684796 |
---|---|
Journal | Neurobiol Aging |
Link | www.ncbi.nlm.nih.gov/pubmed/24684796 |
Study | Heritability and genetic association analysis of cognition in the Diabetes Heart Study. |
Disease/Trait | Cognitive function |
Initial sample | 423 type 2 diabetes cases and 127 unaffected siblings from 257 families |
Replication sample | NA |
Region | 14q32.2 |
Chromosome id | chr14 |
Chromosome position | 96704738 |
Reported gene | VRK1 |
Mapped gene | LOC105370645 - VRK1 |
Upstream gene id | 105370645 |
Downstream gene id | 7443 |
SNP gene ids | |
Upstream gene distance | 23002 |
Downstream gene distance | 92609 |
SNP risk allele | rs17244419-T |
SNPs | rs17244419 |
Merged | 0 |
SNP id current | 17244419 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.03098 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (Phonemic Fluency) |
Or beta | 8.6504 |
%95 Ci | [4.89-12.41] unit decrease |
Platform | Affymetrix [> 371951] (imputed) |
CNV | N |
Mapped trait | cognition |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003925 |
Study accession | GCST002386 |