SNP Detail For rs1723838
1.Mapping Information
Human SNP ID rs1723838
Human chromosome chr11
Human SNP position 73766000
Pig chromosome chr9
Pig SNP position 8995497
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region11q13.4
Chromosome idchr11
Chromosome position73766000
Reported geneRAB6A, MRPL48
Mapped geneRAB6A - MRPL48
Upstream gene id5870
Downstream gene id51642
SNP gene ids
Upstream gene distance4844
Downstream gene distance21872
SNP risk allelers1723838-A
SNPsrs1723838
Merged0
SNP id current1723838
Contextupstream_gene_variant
Intergenic1
Allele frequency0.032
P value0.000004
Pvalue mlog5.39794000867203
P value text(Diet carbohydrate )
Or beta0.02
%95 Ci[NR] %energy increase
PlatformIllumina [899892]
CNVN
Mapped traitenergy intake
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003939
Study accessionGCST001762